Giancarlo Valente, Fabrizio Esposito, Federico de Martino, Rainer Goebel, and Elia Formisano
- Published in print:
- 2010
- Published Online:
- May 2010
- ISBN:
- 9780195372731
- eISBN:
- 9780199776283
- Item type:
- chapter
- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780195372731.003.0009
- Subject:
- Neuroscience, Techniques
This chapter examines the most relevant aspects concerning the use of independent component analysis (ICA) for the analysis of functional magnetic resonance imaging (fMRI) data. In particular, after ...
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This chapter examines the most relevant aspects concerning the use of independent component analysis (ICA) for the analysis of functional magnetic resonance imaging (fMRI) data. In particular, after illustrating the fMRI-ICA model (“Problem formulation and application to fMRI”), the chapter compares the most commonly used ICA algorithms in the context of fMRI data analysis. The problems of choosing the dimensionality of the ICA decomposition, and of selecting the “meaningful” components, are considered. Optimizations of the ICA algorithms for dealing with the specific spatiotemporal properties of the fMRI data, and extensions of the ICA to multisubject fMRI studies, are described. For each of these aspects, different approaches from various groups are briefly reviewed.Less
This chapter examines the most relevant aspects concerning the use of independent component analysis (ICA) for the analysis of functional magnetic resonance imaging (fMRI) data. In particular, after illustrating the fMRI-ICA model (“Problem formulation and application to fMRI”), the chapter compares the most commonly used ICA algorithms in the context of fMRI data analysis. The problems of choosing the dimensionality of the ICA decomposition, and of selecting the “meaningful” components, are considered. Optimizations of the ICA algorithms for dealing with the specific spatiotemporal properties of the fMRI data, and extensions of the ICA to multisubject fMRI studies, are described. For each of these aspects, different approaches from various groups are briefly reviewed.
Vince D. Calhoun and Tom Eichele
- Published in print:
- 2010
- Published Online:
- May 2010
- ISBN:
- 9780195372731
- eISBN:
- 9780199776283
- Item type:
- chapter
- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780195372731.003.0011
- Subject:
- Neuroscience, Techniques
Independent component analysis (ICA) is increasingly utilized as a tool for evaluating the hidden spatiotemporal structure contained within brain imaging data. This chapter first provides a brief ...
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Independent component analysis (ICA) is increasingly utilized as a tool for evaluating the hidden spatiotemporal structure contained within brain imaging data. This chapter first provides a brief overview of ICA and how ICA is applied to functional magnetic resonance imaging (fMRI) data. It then discusses group ICA and the application of group ICA for data fusion, with an emphasis on the methods developed within our group. It also discusses, within a larger context, the many alternative approaches that are feasible and currently in use.Less
Independent component analysis (ICA) is increasingly utilized as a tool for evaluating the hidden spatiotemporal structure contained within brain imaging data. This chapter first provides a brief overview of ICA and how ICA is applied to functional magnetic resonance imaging (fMRI) data. It then discusses group ICA and the application of group ICA for data fusion, with an emphasis on the methods developed within our group. It also discusses, within a larger context, the many alternative approaches that are feasible and currently in use.
Tom Eichele and Vince D. Calhoun
- Published in print:
- 2010
- Published Online:
- May 2010
- ISBN:
- 9780195372731
- eISBN:
- 9780199776283
- Item type:
- chapter
- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780195372731.003.0012
- Subject:
- Neuroscience, Techniques
This chapter introduces and applies the concept of parallel spatial and temporal unmixing with group independent component analysis (ICA) for concurrent electroencephalography-functional magnetic ...
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This chapter introduces and applies the concept of parallel spatial and temporal unmixing with group independent component analysis (ICA) for concurrent electroencephalography-functional magnetic resonance imaging (EEG-fMRI). Hemodynamic response function (HRF) deconvolution and single-trial estimation in the fMRI data were employed, and the single-trial weights were used as predictors for the amplitude modulation in the EEG. For illustration, data from a previously published performance-monitoring experiment were analyzed, in order to identify error-preceding activity in the EEG modality. EEG components that displayed such slow trends, and which were coupled to the corresponding fMRI components, are described. Parallel ICA for analysis of concurrent EEG-fMRI on a trial-by-trial basis is a very useful addition to the toolbelt of researchers interested in multimodal integration.Less
This chapter introduces and applies the concept of parallel spatial and temporal unmixing with group independent component analysis (ICA) for concurrent electroencephalography-functional magnetic resonance imaging (EEG-fMRI). Hemodynamic response function (HRF) deconvolution and single-trial estimation in the fMRI data were employed, and the single-trial weights were used as predictors for the amplitude modulation in the EEG. For illustration, data from a previously published performance-monitoring experiment were analyzed, in order to identify error-preceding activity in the EEG modality. EEG components that displayed such slow trends, and which were coupled to the corresponding fMRI components, are described. Parallel ICA for analysis of concurrent EEG-fMRI on a trial-by-trial basis is a very useful addition to the toolbelt of researchers interested in multimodal integration.
Stefan Debener, Jeremy Thorne, Till R. Schneider, and Filipa Campos Viola
- Published in print:
- 2010
- Published Online:
- May 2010
- ISBN:
- 9780195372731
- eISBN:
- 9780199776283
- Item type:
- chapter
- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780195372731.003.0008
- Subject:
- Neuroscience, Techniques
Independent component analysis (ICA) is a linear decomposition technique that aims to reveal the underlying statistical sources of mixed signals. The EEG signal consists of a mixture of various brain ...
More
Independent component analysis (ICA) is a linear decomposition technique that aims to reveal the underlying statistical sources of mixed signals. The EEG signal consists of a mixture of various brain and non-brain contributions. Accordingly, a valid and powerful unmixing tool promises a better, more accessible representation of the statistical sources contributing to the mixed recorded signal. ICA, being potentially such a tool, may help in the detection of signal sources that cannot be identified on the raw data level alone using other, more conventional techniques. The application of ICA to EEG signals has become popular, as it provides two key features: it is a powerful way to remove artifacts from EEG data, and it helps to disentangle otherwise mixed brain signals. This chapter is concerned with evaluating and optimizing EEG decompositions by means of ICA. First, it discusses typical ICA results with reference to artifact- and brain-related components. Then, it elaborates on different EEG pre-processing steps, considered in light of the statistical assumptions underlying ICA. As such, the motivation for the chapter is to provide some practical guidelines for those researchers who wish to successfully decompose multi-channel EEG recordings.Less
Independent component analysis (ICA) is a linear decomposition technique that aims to reveal the underlying statistical sources of mixed signals. The EEG signal consists of a mixture of various brain and non-brain contributions. Accordingly, a valid and powerful unmixing tool promises a better, more accessible representation of the statistical sources contributing to the mixed recorded signal. ICA, being potentially such a tool, may help in the detection of signal sources that cannot be identified on the raw data level alone using other, more conventional techniques. The application of ICA to EEG signals has become popular, as it provides two key features: it is a powerful way to remove artifacts from EEG data, and it helps to disentangle otherwise mixed brain signals. This chapter is concerned with evaluating and optimizing EEG decompositions by means of ICA. First, it discusses typical ICA results with reference to artifact- and brain-related components. Then, it elaborates on different EEG pre-processing steps, considered in light of the statistical assumptions underlying ICA. As such, the motivation for the chapter is to provide some practical guidelines for those researchers who wish to successfully decompose multi-channel EEG recordings.
Markus Ullsperger
- Published in print:
- 2010
- Published Online:
- May 2010
- ISBN:
- 9780195372731
- eISBN:
- 9780199776283
- Item type:
- chapter
- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780195372731.003.0010
- Subject:
- Neuroscience, Techniques
This chapter gives an overview of data integration methods for simultaneous EEG-fMRI, in which EEG features are extracted and used to parametrically model the fMRI data. Up to now, variants of ...
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This chapter gives an overview of data integration methods for simultaneous EEG-fMRI, in which EEG features are extracted and used to parametrically model the fMRI data. Up to now, variants of EEG-informed fMRI analysis have been most widely and successfully applied. After a brief discussion of the rationale of this approach, its variants for ongoing and event-related EEG phenomena are explained. Studies applying EEG-informed fMRI are reviewed. The advantage of denoising methods such as independent component analysis allowing single-trial quantifications of the EEG phenomena of interest is discussed. To allow clear interpretations of covariations between electrophysiological and hemodynamic measures, further dependent variables such as behavioral data should be taken into account. The chapter closes with an outlook on future questions and ongoing methodological developments.Less
This chapter gives an overview of data integration methods for simultaneous EEG-fMRI, in which EEG features are extracted and used to parametrically model the fMRI data. Up to now, variants of EEG-informed fMRI analysis have been most widely and successfully applied. After a brief discussion of the rationale of this approach, its variants for ongoing and event-related EEG phenomena are explained. Studies applying EEG-informed fMRI are reviewed. The advantage of denoising methods such as independent component analysis allowing single-trial quantifications of the EEG phenomena of interest is discussed. To allow clear interpretations of covariations between electrophysiological and hemodynamic measures, further dependent variables such as behavioral data should be taken into account. The chapter closes with an outlook on future questions and ongoing methodological developments.