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Ancestral Sequence Reconstruction

David A Liberles (ed.)

Published in print:
2007
Published Online:
September 2008
ISBN:
9780199299188
eISBN:
9780191714979
Item type:
book
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780199299188.001.0001
Subject:
Biology, Evolutionary Biology / Genetics

Ancestral sequence reconstruction is a technique of growing importance in molecular evolutionary biology and comparative genomics. As a powerful tool for testing evolutionary and ecological ... More


Symbiomics

Jan Sapp

in Genesis: The Evolution of Biology

Published in print:
2003
Published Online:
September 2007
ISBN:
9780195156195
eISBN:
9780199790340
Item type:
chapter
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780195156195.003.0019
Subject:
Biology, Evolutionary Biology / Genetics

This chapter discusses the concept of symbiosis. Although the bacteria living in our bodies have recently begun to attract some medical interest, for most of the 20th century symbiosis research had ... More


Animal phylogenetics

Alessandro Minelli

in Perspectives in Animal Phylogeny and Evolution

Published in print:
2008
Published Online:
May 2009
ISBN:
9780198566205
eISBN:
9780191713866
Item type:
chapter
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780198566205.003.0002
Subject:
Biology, Animal Biology, Evolutionary Biology / Genetics

The single main root of phylogenetics is Hennig's reformulation of the comparative method, but the empirical basis has increased enormously in recent years with the availability of an exponentially ... More


Ecological genomics

Jacob Höglund

in Evolutionary Conservation Genetics

Published in print:
2009
Published Online:
May 2009
ISBN:
9780199214211
eISBN:
9780191706660
Item type:
chapter
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780199214211.003.0007
Subject:
Biology, Biodiversity / Conservation Biology, Evolutionary Biology / Genetics

This chapter reviews advances in genomics and their applications to conservation genetics. Topics discussed include whole-genome sequencing (WGS), assembly and annotation of the massive amount of ... More


Conservation planning and priorities

Thomas Brooks

in Conservation Biology for All

Published in print:
2010
Published Online:
February 2010
ISBN:
9780199554232
eISBN:
9780191720666
Item type:
chapter
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780199554232.003.0012
Subject:
Biology, Ecology, Biodiversity / Conservation Biology

In this chapter, Thomas Brooks charts the history, state, and prospects of conservation planning and prioritization in terrestrial and aquatic habitats. Conservation planning and prioritization are ... More


Phylogenetics

John E. Lattke

in A Taxonomic Revision and Phylogenetic Analysis of the Ant Genus Gnamptogenys Roger in Southeast Asia and Australasia (Hymenoptera: Formicidae: Ponerinae)

Published in print:
2004
Published Online:
March 2012
ISBN:
9780520098442
eISBN:
9780520916043
Item type:
chapter
Publisher:
University of California Press
DOI:
10.1525/california/9780520098442.003.0003
Subject:
Biology, Animal Biology

Analysis of the phylogenetics of Gnamptogenys Roger produced two most parsimonious trees. Successive weighting selected one of the two trees of the same length and topology. The alternate topology ... More


Bayesian methods

ZIHENG YANG

in Computational Molecular Evolution

Published in print:
2006
Published Online:
April 2010
ISBN:
9780198567028
eISBN:
9780191728280
Item type:
chapter
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780198567028.003.0005
Subject:
Biology, Evolutionary Biology / Genetics

This chapter provides a brief introduction to the theory and computation of Bayesian statistics and its applications to molecular evolution. It uses simple examples, such as distance estimation under ... More


Molecular Evolution: A Statistical Approach

Ziheng Yang

Published in print:
2014
Published Online:
August 2014
ISBN:
9780199602605
eISBN:
9780191782251
Item type:
book
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780199602605.001.0001
Subject:
Biology, Biomathematics / Statistics and Data Analysis / Complexity Studies, Evolutionary Biology / Genetics

This book summarizes the statistical models and computational algorithms for comparative analysis of genetic sequence data in the fields of molecular evolution, molecular phylogenetics, and ... More


A Critique of Experimental Phylogenetics

Todd H. Oakley

in Experimental Evolution: Concepts, Methods, and Applications of Selection Experiments

Published in print:
2009
Published Online:
March 2012
ISBN:
9780520247666
eISBN:
9780520944473
Item type:
chapter
Publisher:
University of California Press
DOI:
10.1525/california/9780520247666.003.0021
Subject:
Biology, Evolutionary Biology / Genetics

This chapter discusses the reasons why phylogenetics has barely grown since its inception, and reviews three primary arguments used to justify experimental phylogenetics. It first rejects the ... More


Phylogenetic, ontogenetic, and functional development of the cerebral cortex

O.D. Creutzfeldt

in Cortex Cerebri: Performance, Structural and Functional Organisation of the Cortex

Published in print:
1995
Published Online:
March 2012
ISBN:
9780198523246
eISBN:
9780191724510
Item type:
chapter
Publisher:
Oxford University Press
DOI:
10.1093/acprof:oso/9780198523246.003.0002
Subject:
Neuroscience, Molecular and Cellular Systems

All vertebrates have a structure corresponding to a cerebral cortex. It covers the subcortical regions of the telencephalon, hence the term pallidum cerebri. In reptiles and fish the homologue of the ... More


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