## Ancestral Sequence Reconstruction

*David A Liberles (ed.)*

- Published in print:
- 2007
- Published Online:
- September 2008
- ISBN:
- 9780199299188
- eISBN:
- 9780191714979
- Item type:
- book

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780199299188.001.0001
- Subject:
- Biology, Evolutionary Biology / Genetics

Ancestral sequence reconstruction is a technique of growing importance in molecular evolutionary biology and comparative genomics. As a powerful tool for testing evolutionary and ecological ... More

## Simulation-based Econometric Methods

*Christian Gouriéroux and Alain Monfort*

- Published in print:
- 1997
- Published Online:
- November 2003
- ISBN:
- 9780198774754
- eISBN:
- 9780191596339
- Item type:
- book

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/0198774753.001.0001
- Subject:
- Economics and Finance, Econometrics

This book deals with a new generation of econometric methods leading to criterion functions without simple analytical expression. The difficulty often comes from the presence of integrals of large ... More

## Likelihood

*N. Thompson Hobbs and Mevin B. Hooten*

### in Bayesian Models: A Statistical Primer for Ecologists

- Published in print:
- 2015
- Published Online:
- October 2017
- ISBN:
- 9780691159287
- eISBN:
- 9781400866557
- Item type:
- chapter

- Publisher:
- Princeton University Press
- DOI:
- 10.23943/princeton/9780691159287.003.0004
- Subject:
- Biology, Ecology

This chapter is an overview of likelihood and maximum likelihood. Likelihood forms the fundamental link between models and data in the Bayesian framework. In addition, maximum likelihood is a widely ... More

## Tracking Truth: Knowledge, Evidence, and Science

*Sherrilyn Roush*

- Published in print:
- 2005
- Published Online:
- February 2006
- ISBN:
- 9780199274734
- eISBN:
- 9780191603228
- Item type:
- book

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/0199274738.001.0001
- Subject:
- Philosophy, Metaphysics/Epistemology

This book develops and defends a new externalist, reliabilist theory of knowledge and evidence, and develops a new view about scientific realism. Knowledge is viewed as a tracking theory that has a ... More

## Artificial likelihoods and estimating functions

*Christopher G. Small and Jinfang Wang*

### in Numerical Methods for Nonlinear Estimating Equations

- Published in print:
- 2003
- Published Online:
- September 2007
- ISBN:
- 9780198506881
- eISBN:
- 9780191709258
- Item type:
- chapter

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780198506881.003.0006
- Subject:
- Mathematics, Probability / Statistics

This chapter discusses the problem of root selection using artificial objective functions associated with an estimating function; the artificial likelihoods discussed in this chapter share many ... More

## Introduction

*Erik J. Olsson*

### in Against Coherence: Truth, Probability, and Justification

- Published in print:
- 2005
- Published Online:
- July 2005
- ISBN:
- 9780199279999
- eISBN:
- 9780191602665
- Item type:
- chapter

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/0199279993.003.0001
- Subject:
- Philosophy, Metaphysics/Epistemology

Two main questions are raised: Does coherence imply truth? Does more coherence imply higher likelihood of truth? Probability theory is chosen as the framework within which these issues will be ... More

## Computational Molecular Evolution

*Ziheng Yang*

- Published in print:
- 2006
- Published Online:
- April 2010
- ISBN:
- 9780198567028
- eISBN:
- 9780191728280
- Item type:
- book

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780198567028.001.0001
- Subject:
- Biology, Evolutionary Biology / Genetics

The field of molecular evolution has experienced explosive growth in recent years due to the rapid accumulation of genetic sequence data, continuous improvements to computer hardware and software, ... More

## Numerical Methods for Nonlinear Estimating Equations

*Christopher G. Small and Jinfang Wang*

- Published in print:
- 2003
- Published Online:
- September 2007
- ISBN:
- 9780198506881
- eISBN:
- 9780191709258
- Item type:
- book

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780198506881.001.0001
- Subject:
- Mathematics, Probability / Statistics

Nonlinearity arises in statistical inference in various ways, with varying degrees of severity, as an obstacle to statistical analysis. More entrenched forms of nonlinearity often require intensive ... More

## Introduction

*Christopher G. Small and Jinfang Wang*

### in Numerical Methods for Nonlinear Estimating Equations

- Published in print:
- 2003
- Published Online:
- September 2007
- ISBN:
- 9780198506881
- eISBN:
- 9780191709258
- Item type:
- chapter

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780198506881.003.0001
- Subject:
- Mathematics, Probability / Statistics

The first part of this chapter provides some background information on the problem of nonlinearity arising in statistical inference. In particular, it discusses the problem of multiple roots and ... More

## Working with roots

*Christopher G. Small and Jinfang Wang*

### in Numerical Methods for Nonlinear Estimating Equations

- Published in print:
- 2003
- Published Online:
- September 2007
- ISBN:
- 9780198506881
- eISBN:
- 9780191709258
- Item type:
- chapter

- Publisher:
- Oxford University Press
- DOI:
- 10.1093/acprof:oso/9780198506881.003.0004
- Subject:
- Mathematics, Probability / Statistics

This chapter studies the broad class of models which have difficult problems of nonlinearity and multiple roots. These models include the mixture models, a model for bivariate normal paired data with ... More